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GCNT1 glucosaminyl (N-acetyl) transferase 1 [ Bos taurus (domestic cattle) ]

Gene ID: 281778, updated on 4-Oct-2024

Summary

Official Symbol
GCNT1provided by VGNC
Official Full Name
glucosaminyl (N-acetyl) transferase 1provided by VGNC
Primary source
VGNC:VGNC:56968
See related
Ensembl:ENSBTAG00000012757
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
C2GnT-L; C2GlcNAcT
Orthologs
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Genomic context

See GCNT1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (52522641..52568603)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 5 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene riboflavin kinase Neighboring gene uncharacterized LOC132345958 Neighboring gene prune homolog 2 with BCH domain Neighboring gene small ribosomal subunit protein eS4-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
C2GNT
beta-1,6-N-acetylglucosaminyltransferase
core 2 GNT
core 2 beta-1,6-N-acetylglucosaminyltransferase
core 2-branching enzyme
core2-GlcNAc-transferase
glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
glucosaminyl transferase 1, core 2
leukocyte type core 2 beta-1,6-N-acetylglucosaminyltransferase
NP_803476.2
XP_005210092.1
XP_005210093.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177510.3NP_803476.2  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for NP_803476.2

    Status: VALIDATED

    Source sequence(s)
    DV807398, EV623477, NKLS02000008
    UniProtKB/Swiss-Prot
    Q92180
    UniProtKB/TrEMBL
    F1MUW5
    Related
    ENSBTAP00000085967.1, ENSBTAT00000114534.1
    Conserved Domains (1) summary
    pfam02485
    Location:123391
    Branch; Core-2/I-Branching enzyme

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    52522641..52568603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005210036.5XP_005210093.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase isoform X1

    See identical proteins and their annotated locations for XP_005210093.1

    UniProtKB/Swiss-Prot
    Q92180
    UniProtKB/TrEMBL
    F1MUW5
    Related
    ENSBTAP00000079027.1, ENSBTAT00000106428.1
    Conserved Domains (1) summary
    pfam02485
    Location:123391
    Branch; Core-2/I-Branching enzyme
  2. XM_005210035.5XP_005210092.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase isoform X1

    See identical proteins and their annotated locations for XP_005210092.1

    UniProtKB/Swiss-Prot
    Q92180
    UniProtKB/TrEMBL
    F1MUW5
    Related
    ENSBTAP00000095720.1, ENSBTAT00000118447.1
    Conserved Domains (1) summary
    pfam02485
    Location:123391
    Branch; Core-2/I-Branching enzyme