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HCRT hypocretin neuropeptide precursor [ Bos taurus (domestic cattle) ]

Gene ID: 281222, updated on 4-Oct-2024

Summary

Official Symbol
HCRTprovided by VGNC
Official Full Name
hypocretin neuropeptide precursorprovided by VGNC
Primary source
VGNC:VGNC:29780
See related
BGD:BT11240; Ensembl:ENSBTAG00000000665
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See HCRT in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (42302320..42303565, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene RAB5C, member RAS oncogene family Neighboring gene potassium voltage-gated channel subfamily H member 4 Neighboring gene uncharacterized LOC132343075 Neighboring gene GH3 domain containing Neighboring gene signal transducer and activator of transcription 5B

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
hypocretin neuropeptide precursor
Names
hcrt1
hypocretin (orexin) neuropeptide
hypocretin-1
orexin
orexin-A
prepro-orexin
preprohypocretin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166520.1NP_001159992.1  hypocretin neuropeptide precursor precursor

    See identical proteins and their annotated locations for NP_001159992.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000019
    UniProtKB/Swiss-Prot
    F1MRP1, P56717
    Related
    ENSBTAP00000000875.4, ENSBTAT00000000875.6
    Conserved Domains (1) summary
    pfam02072
    Location:1130
    Orexin; Prepro-orexin

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    42302320..42303565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)