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LOX lysyl oxidase [ Bos taurus (domestic cattle) ]

Gene ID: 280841, updated on 4-Oct-2024

Summary

Official Symbol
LOXprovided by VGNC
Official Full Name
lysyl oxidaseprovided by VGNC
Primary source
VGNC:VGNC:30951
See related
BGD:BT14850; Ensembl:ENSBTAG00000012994
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See LOX in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (31755215..31767581)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 475 Neighboring gene uncharacterized LOC132345725 Neighboring gene serum response factor binding protein 1 Neighboring gene uncharacterized LOC101907246

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein-lysine 6-oxidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine oxidation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
protein-lysine 6-oxidase
NP_776357.2
XP_005209160.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173932.4NP_776357.2  protein-lysine 6-oxidase precursor

    See identical proteins and their annotated locations for NP_776357.2

    Status: PROVISIONAL

    Source sequence(s)
    BC140667
    UniProtKB/Swiss-Prot
    P33072, Q95L38
    UniProtKB/TrEMBL
    A5D7S7
    Related
    ENSBTAP00000017275.3, ENSBTAT00000017275.5
    Conserved Domains (1) summary
    pfam01186
    Location:214414
    Lysyl_oxidase; Lysyl oxidase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    31755215..31767581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005209103.5XP_005209160.1  protein-lysine 6-oxidase isoform X1

    See identical proteins and their annotated locations for XP_005209160.1

    UniProtKB/Swiss-Prot
    P33072, Q95L38
    Conserved Domains (1) summary
    pfam01186
    Location:214410
    Lysyl_oxidase; Lysyl oxidase