U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SAPIO_CDS5169 Dolichyl-phosphate-mannose--protein mannosyltransferase 2 [ Scedosporium apiospermum ]

Gene ID: 27724241, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
SAPIO_CDS5169
Gene description
Dolichyl-phosphate-mannose--protein mannosyltransferase 2
Locus tag
SAPIO_CDS5169
See related
FungiDB:SAPIO_CDS5169; VEuPathDB:SAPIO_CDS5169
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Scedosporium apiospermum (strain: IHEM 14462, nat-host: Homo sapiens)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SAPIO_CDS5169 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_015971798.1Genomic Context describing neighboring genes Neighboring gene putative kinetochore protein spc-25 Neighboring gene Chy and ring finger domain-containing protein Neighboring gene pseudo Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015971798.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Draft Genome Sequence of the Pathogenic Fungus Scedosporium apiospermum. Vandeputte P, et al. Genome Announc, 2014 Oct 2. PMID 25278533, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Dolichyl-phosphate-mannose--protein mannosyltransferase 2
XP_016642883.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971798.1 Reference assembly

    Range
    404615..407237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016787552.1 → XP_016642883.1  Dolichyl-phosphate-mannose--protein mannosyltransferase 2 [Scedosporium apiospermum]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A084G6X2
    Conserved Domains (4) summary
    smart00472
    Location:400 → 455
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:58 → 739
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:62 → 305
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:538 → 735
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases