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SAPIO_CDS3617 Dolichyl-phosphate-mannose--protein mannosyltransferase 4 [ Scedosporium apiospermum ]

Gene ID: 27722689, updated on 17-May-2024

Summary

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Gene symbol
SAPIO_CDS3617
Gene description
Dolichyl-phosphate-mannose--protein mannosyltransferase 4
Locus tag
SAPIO_CDS3617
See related
FungiDB:SAPIO_CDS3617; VEuPathDB:SAPIO_CDS3617
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Scedosporium apiospermum (strain: IHEM 14462, nat-host: Homo sapiens)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium
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Genomic context

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See SAPIO_CDS3617 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_015971789.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971789.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Pathogenic Fungus Scedosporium apiospermum. Vandeputte P, et al. Genome Announc, 2014 Oct 2. PMID 25278533, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Dolichyl-phosphate-mannose--protein mannosyltransferase 4
XP_016644379.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971789.1 Reference assembly

    Range
    2299240..2301739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016786373.1 → XP_016644379.1  Dolichyl-phosphate-mannose--protein mannosyltransferase 4 [Scedosporium apiospermum]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A084GB68
    Conserved Domains (5) summary
    smart00472
    Location:337 → 391
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:31 → 774
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:57 → 306
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:541 → 766
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
    cl19745
    Location:473 → 519
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
Nucleotide Protein
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