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SAPIO_CDS10594 Chitin synthase 1 [ Scedosporium apiospermum ]

Gene ID: 27719806, updated on 26-Jun-2024

Summary

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Gene symbol
SAPIO_CDS10594
Gene description
Chitin synthase 1
Locus tag
SAPIO_CDS10594
See related
FungiDB:SAPIO_CDS10594; VEuPathDB:SAPIO_CDS10594
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Scedosporium apiospermum (strain: IHEM 14462, nat-host: Homo sapiens)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium
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Genomic context

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See SAPIO_CDS10594 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_015971877.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971877.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Pathogenic Fungus Scedosporium apiospermum. Vandeputte P, et al. Genome Announc, 2014 Oct 2. PMID 25278533, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Chitin synthase 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971877.1 Reference assembly

    Range
    109715..112652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016784159.1 → XP_016638399.1  Chitin synthase 1 [Scedosporium apiospermum]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A084FU38
    Conserved Domains (4) summary
    COG1215
    Location:340 → 687
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:224 → 391
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:146 → 222
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:339 → 460
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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