U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

phiLC3p05 orf76 [ Lactococcus phage phiLC3 ]

Gene ID: 2767967, updated on 31-May-2023

Summary

Go to the top of the page Help
Gene symbol
phiLC3p05
Gene description
orf76
Locus tag
phiLC3p05
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lactococcus phage phiLC3 (strain: IMN-C3, nat-host: Lactococcus lactis subsp. cremoris)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Siphoviridae
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_005822.1 (3222..3452)

NC_005822.1Genomic Context describing neighboring genes Neighboring gene orf286 Neighboring gene transcriptional regulator Neighboring gene orf236 Neighboring gene DUF771 domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_005822.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Complete genome sequence of the Lactococcus lactis temperate phage phiLC3: comparative analysis of phiLC3 and its relatives in lactococci and streptococci. Blatny JM, et al. Virology, 2004 Jan 5. PMID 14972551
  2. Transcriptional analysis of the genetic elements involved in the lysogeny/lysis switch in the temperate lactococcal bacteriophage phiLC3, and identification of the Cro-like protein ORF76. Blatny JM, et al. Mol Genet Genomics, 2003 Jul. PMID 12759744
  3. Analysis of a regulator involved in the genetic switch between lysis and lysogeny of the temperate Lactococcus lactis phage phi LC3. Blatny JM, et al. Mol Genet Genomics, 2001 Mar. PMID 11370866
  4. A highly efficient and stable system for site-specific integration of genes and plasmids into the phage phiLC3 attachment site (attB) of the Lactococcus lactis chromosome. Lillehaug D, et al. Gene, 1997 Mar 25. PMID 9099871
  5. Characterization of genetic elements required for site-specific integration of the temperate lactococcal bacteriophage phi LC3 and construction of integration-negative phi LC3 mutants. Lillehaug D, et al. J Bacteriol, 1993 Mar. PMID 8449882, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
cro2009

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005822.1 Reference assembly

    Range
    3222..3452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_996679.1 cro2009 [Lactococcus phage phiLC3]

    See identical proteins and their annotated locations for NP_996679.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9G0B7
    Conserved Domains (1) summary
    cl22854
    Location:6 → 62
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials