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SPSK_05523 U2 snRNP complex subunit RDS3 [ Sporothrix schenckii 1099-18 ]

Gene ID: 27667544, updated on 17-May-2024

Summary

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Gene symbol
SPSK_05523
Gene description
U2 snRNP complex subunit RDS3
Locus tag
SPSK_05523
See related
FungiDB:SPSK_05523; VEuPathDB:SPSK_05523
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sporothrix schenckii 1099-18 (strain: 1099-18, nat-host: Homo sapiens, culture-collection: ATCC:MYA-4821)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Sporothrix
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Genomic context

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See SPSK_05523 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_015971150.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3 Neighboring gene uncharacterized protein Neighboring gene peroxin 26 Neighboring gene kinetochore protein NNF1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971150.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asexual propagation of a virulent clone complex in a human and feline outbreak of sporotrichosis. Teixeira Mde M, et al. Eukaryot Cell, 2015 Feb. PMID 25480940, Free PMC Article
  2. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis. Teixeira MM, et al. BMC Genomics, 2014 Oct 29. PMID 25351875, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U2 snRNP complex subunit RDS3
XP_016583679.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971150.1 Reference assembly

    Range
    3593439..3594243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016732267.1 → XP_016583679.1  U2 snRNP complex subunit RDS3 [Sporothrix schenckii 1099-18]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0F2LU58
    Conserved Domains (1) summary
    pfam03660
    Location:109 → 204
    PHF5; PHF5-like protein
Nucleotide Protein
Heading Accession and Version

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