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SPSK_03420 beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [ Sporothrix schenckii 1099-18 ]

Gene ID: 27665535, updated on 17-May-2024

Summary

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Gene symbol
SPSK_03420
Gene description
beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
Locus tag
SPSK_03420
See related
FungiDB:SPSK_03420; VEuPathDB:SPSK_03420
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sporothrix schenckii 1099-18 (strain: 1099-18, nat-host: Homo sapiens, culture-collection: ATCC:MYA-4821)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Sporothrix
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Genomic context

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See SPSK_03420 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_015971148.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase methylesterase 1 Neighboring gene threonineeeee aldolase Neighboring gene uncharacterized protein Neighboring gene RNA polymerase I-specific transcription initiation factor RRN3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971148.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asexual propagation of a virulent clone complex in a human and feline outbreak of sporotrichosis. Teixeira Mde M, et al. Eukaryot Cell, 2015 Feb. PMID 25480940, Free PMC Article
  2. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis. Teixeira MM, et al. BMC Genomics, 2014 Oct 29. PMID 25351875, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
XP_016585240.1
  • identified by sequence similarity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971148.1 Reference assembly

    Range
    2055110..2056345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016730258.1 → XP_016585240.1  beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Sporothrix schenckii 1099-18]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0F2M0G6, U7PQX4
    Conserved Domains (1) summary
    pfam04724
    Location:58 → 397
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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