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SPSK_03022 THO complex subunit 1 [ Sporothrix schenckii 1099-18 ]

Gene ID: 27665143, updated on 17-May-2024

Summary

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Gene symbol
SPSK_03022
Gene description
THO complex subunit 1
Locus tag
SPSK_03022
See related
FungiDB:SPSK_03022; VEuPathDB:SPSK_03022
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sporothrix schenckii 1099-18 (strain: 1099-18, nat-host: Homo sapiens, culture-collection: ATCC:MYA-4821)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Sporothrix
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Genomic context

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See SPSK_03022 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_015971148.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene intron-binding protein aquarius Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971148.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asexual propagation of a virulent clone complex in a human and feline outbreak of sporotrichosis. Teixeira Mde M, et al. Eukaryot Cell, 2015 Feb. PMID 25480940, Free PMC Article
  2. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis. Teixeira MM, et al. BMC Genomics, 2014 Oct 29. PMID 25351875, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 1
XP_016585000.1
  • identified by sequence similarity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971148.1 Reference assembly

    Range
    1295064..1298004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016729866.1 → XP_016585000.1  THO complex subunit 1 [Sporothrix schenckii 1099-18]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0F2LZQ4, U7PSP6
    Conserved Domains (2) summary
    pfam11957
    Location:99 → 617
    efThoc1; THO complex subunit 1 transcription elongation factor
    cl17190
    Location:673 → 846
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
Nucleotide Protein
Heading Accession and Version

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