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SPSK_01438 alpha,alpha-trehalose-phosphate synthase (UDP-forming) [ Sporothrix schenckii 1099-18 ]

Gene ID: 27663629, updated on 17-May-2024

Summary

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Gene symbol
SPSK_01438
Gene description
alpha,alpha-trehalose-phosphate synthase (UDP-forming)
Locus tag
SPSK_01438
See related
FungiDB:SPSK_01438; VEuPathDB:SPSK_01438
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sporothrix schenckii 1099-18 (strain: 1099-18, nat-host: Homo sapiens, culture-collection: ATCC:MYA-4821)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Sporothrix
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Genomic context

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See SPSK_01438 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_015971143.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene short chain dehydrogenase reductase Neighboring gene NF-X1 finger and helicase protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971143.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asexual propagation of a virulent clone complex in a human and feline outbreak of sporotrichosis. Teixeira Mde M, et al. Eukaryot Cell, 2015 Feb. PMID 25480940, Free PMC Article
  2. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis. Teixeira MM, et al. BMC Genomics, 2014 Oct 29. PMID 25351875, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase (UDP-forming)
XP_016590137.1
  • identified by sequence similarity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971143.1 Reference assembly

    Range
    1935889..1938752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016728352.1 → XP_016590137.1  alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Sporothrix schenckii 1099-18]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0F2MH29, U7PIJ2
    Conserved Domains (3) summary
    cd03788
    Location:117 → 552
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PRK14501
    Location:122 → 880
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
    pfam02358
    Location:586 → 869
    Trehalose_PPase; Trehalose-phosphatase
Nucleotide Protein
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