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Ankyrin repeat family protein with DHHC zinc finger domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 2745525, updated on 18-Sep-2024

Summary

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Official Full Name
Ankyrin repeat family protein with DHHC zinc finger domain-containing protein
Primary source
TAIR:AT2G14255
Locus tag
AT2G14255
See related
Araport:AT2G14255
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Sequence:
Chromosome: 2; NC_003071.7 (6036804..6041097)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene proline iminopeptidase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_201724.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 

General protein information

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Preferred Names
Ankyrin repeat family protein with DHHC zinc finger domain-containing protein
NP_973453.2
  • Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    6036804..6041097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_201724.3 → NP_973453.2  Ankyrin repeat family protein with DHHC zinc finger domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973453.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A2RVQ6, Q3EC11, Q9ZQ58
    UniProtKB/TrEMBL
    A0A178VPK2, A0A5S9WY99, A0A654EU52
    Conserved Domains (7) summary
    smart00248
    Location:57 → 85
    ANK; ankyrin repeats
    cd00204
    Location:85 → 211
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01529
    Location:363 → 492
    zf-DHHC; DHHC palmitoyltransferase
    pfam12796
    Location:62 → 188
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:28 → 78
    Ank_4; Ankyrin repeats (many copies)
    pfam13857
    Location:110 → 165
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:92 → 155
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3EC11.2

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