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DISC2 disrupted in schizophrenia 2 [ Homo sapiens (human) ]

Gene ID: 27184, updated on 10-Oct-2023

Summary

Official Symbol
DISC2provided by HGNC
Official Full Name
disrupted in schizophrenia 2provided by HGNC
Primary source
HGNC:HGNC:2889
See related
MIM:606271; AllianceGenome:HGNC:2889
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DISC1OS; DISC1-AS1; NCRNA00015
Summary
DISC2 is thought to specify a noncoding RNA molecule antisense to DISC1 (MIM 605210). Both genes were found to be disrupted by a translocation in a large schizophrenia (MIM 181500) kindred.[supplied by OMIM, Jul 2002]
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Genomic context

Location:
1q42.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (231814626..231818517, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (231200158..231204047, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (231950372..231954263, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene TSNAX-DISC1 readthrough (NMD candidate) Neighboring gene long intergenic non-protein coding RNA 582 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2731 Neighboring gene MPRA-validated peak764 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1954 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1955 Neighboring gene MPRA-validated peak765 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:231787555-231788055 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:231787054-231787554 Neighboring gene DISC1 scaffold protein Neighboring gene ReSE screen-validated silencer GRCh37_chr1:231830220-231830402 Neighboring gene RNA, U5A small nuclear 5, pseudogene Neighboring gene MPRA-validated peak767 silencer Neighboring gene uncharacterized LOC105373170 Neighboring gene NANOG hESC enhancer GRCh37_chr1:231967105-231967615 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1956 Neighboring gene DISC1 intronic transcript 1 Neighboring gene uncharacterized LOC124904549

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Schizophrenia
MedGen: C0036341 OMIM: 181500 GeneReviews: Not available
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EBI GWAS Catalog

Description
Genome-wide association of lipid-lowering response to statins in combined study populations.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • DISC1 antisense RNA 1
  • DISC1 opposite strand
  • disrupted in schizophrenia 2 (non-protein coding)

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002227.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL136171

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    231814626..231818517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    231200158..231204047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)