U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RNU2-3P RNA, U2 small nuclear 3, pseudogene [ Homo sapiens (human) ]

Gene ID: 26854, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
RNU2-3Pprovided by HGNC
Official Full Name
RNA, U2 small nuclear 3, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:10153
See related
Ensembl:ENSG00000222076 AllianceGenome:HGNC:10153
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U2; RNU2P1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RNU2-3P in Genome Data Viewer
Location:
15q26.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (95745804..95745991)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (93510420..93510607)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (96289033..96289220)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370993 Neighboring gene long intergenic non-protein coding RNA 924 Neighboring gene Sharpr-MPRA regulatory region 12634 Neighboring gene uncharacterized LOC105370995 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:96170229-96170930 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:96192598-96192753 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10136 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:96259179-96259408 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10137 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10138 Neighboring gene NANOG hESC enhancer GRCh37_chr15:96427328-96427829 Neighboring gene uncharacterized LOC124903582 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:96453692-96454619 Neighboring gene NANOG hESC enhancer GRCh37_chr15:96454690-96455312 Neighboring gene CRISPRi-validated cis-regulatory element chr15.3490 Neighboring gene uncharacterized LOC112268156 Neighboring gene uncharacterized LOC105370998

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Human DNA sequences complementary to the small nuclear RNA U2. Westin G, et al. Nucleic Acids Res, 1981 Dec 11. PMID 6172777, Free PMC Article
  2. Genes and pseudogenes for human U2 RNA. Implications for the mechanism of pseudogene formation. Hammarström K, et al. J Mol Biol, 1984 Oct 25. PMID 6209403

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

Go to the top of the page Help

Other Names

  • RNA, U2 small nuclear pseudogene 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001258.3 

    Range
    101..288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    95745804..95745991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    93510420..93510607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials