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PGBD3P2 piggyBac transposable element derived 3 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 267006, updated on 17-Sep-2024

Summary

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Official Symbol
PGBD3P2provided by HGNC
Official Full Name
piggyBac transposable element derived 3 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:19397
See related
Ensembl:ENSG00000233787 AllianceGenome:HGNC:19397
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See PGBD3P2 in Genome Data Viewer
Location:
5p13.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (29881699..29882953, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (29995701..29996955, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (29881806..29883060, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374703 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:29795280-29796479 Neighboring gene ZCCHC10 pseudogene 2 Neighboring gene uncharacterized LOC105374704 Neighboring gene MPRA-validated peak5216 silencer Neighboring gene uncharacterized LOC105374705 Neighboring gene RN7SK pseudogene 207 Neighboring gene NANOG hESC enhancer GRCh37_chr5:29984274-29984775 Neighboring gene uncharacterized LOC105374706

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002401.4 

    Range
    101..1355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    29881699..29882953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    29995701..29996955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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