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NUP50P3 nucleoporin 50 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 266786, updated on 17-Sep-2024

Summary

Official Symbol
NUP50P3provided by HGNC
Official Full Name
nucleoporin 50 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:29927
See related
AllianceGenome:HGNC:29927
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See NUP50P3 in Genome Data Viewer
Location:
5p14.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (20302004..20305825, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (20303842..20307663, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (20302113..20305934, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene cadherin 18 Neighboring gene uncharacterized LOC105374672 Neighboring gene MPRA-validated peak5177 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:19859069-19859650 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:19927819-19928466 Neighboring gene NANOG hESC enhancer GRCh37_chr5:20020216-20020741 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:20275974-20277173 Neighboring gene uncharacterized LOC124900948 Neighboring gene CDH18 antisense RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr5:20601861-20602362 Neighboring gene Sharpr-MPRA regulatory region 13238 Neighboring gene long intergenic non-protein coding RNA 2241 Neighboring gene long intergenic non-protein coding RNA 2146 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:20679066-20680265 Neighboring gene UBX domain protein 2A pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002389.5 

    Range
    101..3922
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    20302004..20305825 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    20303842..20307663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)