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jlb1_053 endolysin [ Lactobacillus phage phi jlb1 ]

Gene ID: 26660929, updated on 8-Jan-2023

Summary

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Gene symbol
jlb1_053
Gene description
endolysin
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lactobacillus phage phi jlb1 (nat-host: Lactobacillus gasseri ADH)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Myoviridae
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Genomic context

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Sequence:
NC_024206.1 (36770..37702)

NC_024206.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene XkdX family protein Neighboring gene hypothetical protein Neighboring gene holin Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024206.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Spontaneously induced prophages in Lactobacillus gasseri contribute to horizontal gene transfer. Baugher JL, et al. Appl Environ Microbiol, 2014 Jun. PMID 24682298, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
endolysin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024206.1 Reference assembly

    Range
    36770..37702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009035520.1 endolysin [Lactobacillus phage phi jlb1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    X2CXX8
    Conserved Domains (2) summary
    cd06415
    Location:8 → 204
    GH25_Cpl1-like; Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, ...
    smart00287
    Location:240 → 301
    SH3b; Bacterial SH3 domain homologues
Nucleotide Protein
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Molecular Biology Databases