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Creg2 cellular repressor of E1A-stimulated genes 2 [ Mus musculus (house mouse) ]

Gene ID: 263764, updated on 2-Nov-2024

Summary

Official Symbol
Creg2provided by MGI
Official Full Name
cellular repressor of E1A-stimulated genes 2provided by MGI
Primary source
MGI:MGI:1928333
See related
Ensembl:ENSMUSG00000050967 AllianceGenome:MGI:1928333
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A830098L22Rik
Summary
Located in Golgi apparatus and endoplasmic reticulum. Is expressed in lung epithelium; medulla oblongata; medulla oblongata basal plate mantle layer; and nasal cavity respiratory epithelium. Orthologous to human CREG2 (cellular repressor of E1A stimulated genes 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in cortex adult (RPKM 9.6), frontal lobe adult (RPKM 8.0) and 6 other tissues See more
Orthologs
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Genomic context

See Creg2 in Genome Data Viewer
Location:
1 B; 1 18.37 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (39657574..39690350, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (39618406..39652052, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene ring finger protein 149 Neighboring gene predicted gene, 23722 Neighboring gene predicted gene, 51620 Neighboring gene predicted gene 5100 Neighboring gene RIKEN cDNA D930019O06 Neighboring gene STARR-seq mESC enhancer starr_00725 Neighboring gene STARR-seq mESC enhancer starr_00727 Neighboring gene regulatory factor X 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_170597.4NP_733485.1  protein CREG2 precursor

    See identical proteins and their annotated locations for NP_733485.1

    Status: VALIDATED

    Source sequence(s)
    AC119809, AK044192
    Consensus CDS
    CCDS14908.1
    UniProtKB/Swiss-Prot
    Q14AL7, Q8BGC9, Q8BL64, Q8BX89, Q8K049
    UniProtKB/TrEMBL
    Q3UY95, Q3UYF8
    Related
    ENSMUSP00000052871.5, ENSMUST00000053355.6
    Conserved Domains (1) summary
    pfam13883
    Location:116282
    Pyrid_oxidase_2; Pyridoxamine 5'-phosphate oxidase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    39657574..39690350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)