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Pdw03_5669 Chitin synthase A [ Penicillium digitatum ]

Gene ID: 26229087, updated on 31-Oct-2024

Summary

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Gene symbol
Pdw03_5669
Gene description
Chitin synthase A
Locus tag
Pdw03_5669
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Penicillium digitatum (strain: PdW03, nat-host: Citrus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium
Old locus tag
PDIP_07640
Orthologs
Aspergillus fumigatus all
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Genomic context

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See Pdw03_5669 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Sequence:
Chromosome: 6; NC_089389.1 (1857368..1860566, complement)

Chromosome 6 - NC_089389.1Genomic Context describing neighboring genes Neighboring gene ABC multidrug transporter, putative Neighboring gene Integral membrane protein Neighboring gene Protein-tyrosine phosphatase, low molecular weight, mammalian Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089389.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Chitin synthase A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089389.1 Reference assembly

    Range
    1857368..1860566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014682663.1 → XP_014538149.1  Chitin synthase A [Penicillium digitatum]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    J9WUN5, K9FN69, K9GGS2, R4I4E7
    Conserved Domains (4) summary
    COG1215
    Location:361 → 694
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    PRK14086
    Location:6 → 170
    dnaA; chromosomal replication initiator protein DnaA
    pfam01644
    Location:254 → 417
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:180 → 253
    Chitin_synth_1N; Chitin synthase N-terminal
Nucleotide Protein
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