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A1Q1_08132 beta-1,4-mannosyl-glycoprotein [ Trichosporon asahii var. asahii CBS 2479 ]

Gene ID: 25991644, updated on 17-May-2024

Summary

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Gene symbol
A1Q1_08132
Gene description
beta-1,4-mannosyl-glycoprotein
Locus tag
A1Q1_08132
See related
FungiDB:A1Q1_08132; VEuPathDB:A1Q1_08132
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichosporon asahii var. asahii CBS 2479 (strain: CBS 2479, variety: asahii, culture-collection: CBS:2479, type-material: culture from type material of Trichosporon asahii)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Trichosporonales; Trichosporonaceae; Trichosporon
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Genomic context

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See A1Q1_08132 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_014040906.1Genomic Context describing neighboring genes Neighboring gene Etf1 Neighboring gene hypothetical protein Neighboring gene phospholipid metabolism-related protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014040906.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence of CBS 2479, the standard type strain of Trichosporon asahii. Yang RY, et al. Eukaryot Cell, 2012 Nov. PMID 23104369, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014040906.1 Reference assembly

    Range
    506604..507668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014326279.1 → XP_014181754.1  beta-1,4-mannosyl-glycoprotein [Trichosporon asahii var. asahii CBS 2479]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    J6F621, K1VMI1
    Conserved Domains (1) summary
    pfam04724
    Location:31 → 352
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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