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Or8j3c olfactory receptor family 8 subfamily J member 3C [ Mus musculus (house mouse) ]

Gene ID: 259082, updated on 2-Nov-2024

Summary

Official Symbol
Or8j3cprovided by MGI
Official Full Name
olfactory receptor family 8 subfamily J member 3Cprovided by MGI
Primary source
MGI:MGI:3030896
See related
Ensembl:ENSMUSG00000090059 AllianceGenome:MGI:3030896
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MOR185-1; Olfr1062
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
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Genomic context

See Or8j3c in Genome Data Viewer
Location:
2 D; 2 49.8 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (86253063..86254018, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (86422719..86423674, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene olfactory receptor 1060, pseudogene 1 Neighboring gene olfactory receptor family 8 subfamily K member 25 Neighboring gene olfactory receptor family 8 subfamily K member 26, pseudogene 1 Neighboring gene olfactory receptor family 8 subfamily Y member 2, pseudogene 1

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity ISA
Inferred from Sequence Alignment
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISA
Inferred from Sequence Alignment
more info
PubMed 
involved_in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within sensory perception of smell ISA
Inferred from Sequence Alignment
more info
PubMed 
Component Evidence Code Pubs
located_in membrane ISA
Inferred from Sequence Alignment
more info
PubMed 

General protein information

Preferred Names
olfactory receptor 1062
Names
GA_x6K02T2Q125-47892992-47892045
olfactory receptor MOR185-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_147078.2NP_667289.2  olfactory receptor 1062

    See identical proteins and their annotated locations for NP_667289.2

    Status: VALIDATED

    Source sequence(s)
    AL772265
    Consensus CDS
    CCDS38171.1
    UniProtKB/TrEMBL
    Q7TR71, Q8VGY2
    Related
    ENSMUSP00000100848.3, ENSMUST00000105213.5
    Conserved Domains (2) summary
    pfam00001
    Location:41290
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:31305
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    86253063..86254018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)