Or2m13 olfactory receptor family 2 subfamily M member 13 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Or2m13provided by MGI
Official Full Name: olfactory receptor family 2 subfamily M member 13provided by MGI
Primary source: MGI:MGI:3029999
See related: Ensembl:ENSMUSG00000050158 AllianceGenome:MGI:3029999
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Olfr165; MOR279-1
Summary: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
Expression: Biased expression in large intestine adult (RPKM 1.8), small intestine adult (RPKM 1.3) and 2 other tissues See more
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Genomic context

Location:: 16 A3; 16 12.02 cM

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	16	NC_000082.7 (19225741..19249454, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	16	NC_000082.6 (19406991..19430704, complement)

Chromosome 16 - NC_000082.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables olfactory receptor activity	IBA Inferred from Biological aspect of Ancestor more info
enables olfactory receptor activity	ISA Inferred from Sequence Alignment more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
involved_in detection of chemical stimulus involved in sensory perception of smell	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within sensory perception of smell	ISA Inferred from Sequence Alignment more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	ISA Inferred from Sequence Alignment more info	PubMed
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: olfactory receptor family 2 subfamily M member 13

Names: GA_x54KRFPKG5P-15855164-15854223; olfactory receptor 165; olfactory receptor MOR279-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_146466.1 → NP_666677.1 olfactory receptor family 2 subfamily M member 13

See identical proteins and their annotated locations for NP_666677.1

Status: PROVISIONAL

Source sequence(s)

AY073632

Consensus CDS

CCDS28033.1

UniProtKB/TrEMBL

A0A0U1RPS5, Q78MG2, Q8VFA2

Related

ENSMUSP00000146100.3, ENSMUST00000206410.3

Conserved Domains (1) summary

cd15421
Location:26 → 302

7tmA_OR2T-like; olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000082.7 Reference GRCm39 C57BL/6J

Range

19225741..19249454 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_017316984.1 → XP_017172473.1 olfactory receptor family 2 subfamily M member 13 isoform X1

UniProtKB/TrEMBL

A0A0U1RPS5, Q78MG2, Q8VFA2

Related

ENSMUSP00000145668.3, ENSMUST00000206110.4

Conserved Domains (1) summary

cd15421
Location:26 → 302

7tmA_OR2T-like; olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors