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Or6c7 olfactory receptor family 6 subfamily C member 7 [ Mus musculus (house mouse) ]

Gene ID: 258148, updated on 17-Aug-2024

Summary

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Official Symbol
Or6c7provided by MGI
Official Full Name
olfactory receptor family 6 subfamily C member 7provided by MGI
Primary source
MGI:MGI:3030623
See related
Ensembl:ENSMUSG00000111273 AllianceGenome:MGI:3030623
Gene type
protein coding
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Olfr789; MOR111-13; MOR111-9P; Olfr789-ps1
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Annotation information
Note: This locus was previously defined as a pseudogene but is now represented as protein coding. Even though there is no evidence of transcription, this locus does have the potential to encode a well-conserved protein. [11 Mar 2015]
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Genomic context

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See Or6c7 in Genome Data Viewer
Location:
10 D3; 10 77.35 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (129322881..129323819)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (129487012..129487950)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene cofilin 1, non-muscle pseudogene Neighboring gene olfactory receptor family 6 subfamily C member 3 Neighboring gene olfactory receptor family 6 subfamily C member 75 Neighboring gene olfactory receptor family 6 subfamily C member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Odorant and vomeronasal receptor genes in two mouse genome assemblies. Zhang X, et al. Genomics, 2004 May. PMID 15081110
  2. The olfactory receptor gene superfamily of the mouse. Zhang X, et al. Nat Neurosci, 2002 Feb. PMID 11802173
  3. Different evolutionary processes shaped the mouse and human olfactory receptor gene families. Young JM, et al. Hum Mol Genet, 2002 Mar 1. PMID 11875048
  4. Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Young JM, et al. Genome Biol, 2003. PMID 14611657, Free PMC Article
  5. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
olfactory receptor family 6 subfamily C member 7
Names
GA_x6K02T2PULF-11165842-11166815
olfactory receptor MOR111-9P

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305433.1 → NP_001292362.1  olfactory receptor family 6 subfamily C member 7

    Status: INFERRED

    Source sequence(s)
    AC136214
    Consensus CDS
    CCDS83769.1
    UniProtKB/TrEMBL
    A0A1L1SV77
    Related
    ENSMUSP00000150482.2, ENSMUST00000213236.2
    Conserved Domains (2) summary
    pfam00001
    Location:39 → 288
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:31 → 300
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    129322881..129323819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_002035.2: Suppressed sequence

    Description
    NG_002035.2: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials