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HPODL_03202 Protein required for beta-1,6 glucan biosynthesis [ Ogataea parapolymorpha DL-1 ]

Gene ID: 25772645, updated on 25-Jan-2024

Summary

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Gene symbol
HPODL_03202
Gene description
Protein required for beta-1,6 glucan biosynthesis
Locus tag
HPODL_03202
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ogataea parapolymorpha DL-1 (strain: DL-1, type-material: holotype of Candida parapolymorpha)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea
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Genomic context

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See HPODL_03202 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_027860.1 (1440982..1445016)

Chromosome VII - NC_027860.1Genomic Context describing neighboring genes Neighboring gene Pre-mRNA-processing protein 45 Neighboring gene Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function Neighboring gene MFS transporter Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein required for beta-1,6 glucan biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_027860.1 Reference assembly

    Range
    1440982..1445016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014077540.1 → XP_013933015.1  Protein required for beta-1,6 glucan biosynthesis [Ogataea parapolymorpha DL-1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W1QB37
    Conserved Domains (5) summary
    pfam06427
    Location:941 → 1041
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
    pfam18400
    Location:31 → 208
    Thioredoxin_12; Thioredoxin-like domain
    pfam18401
    Location:261 → 375
    Thioredoxin_13; Thioredoxin-like domain
    pfam18402
    Location:396 → 608
    Thioredoxin_14; Thioredoxin-like domain
    pfam18404
    Location:1065 → 1333
    Glyco_transf_24; Glucosyltransferase 24
Nucleotide Protein
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