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HPODL_01643 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex [ Ogataea parapolymorpha DL-1 ]

Gene ID: 25771102, updated on 30-Dec-2023

Summary

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Gene symbol
HPODL_01643
Gene description
Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex
Locus tag
HPODL_01643
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ogataea parapolymorpha DL-1 (strain: DL-1, type-material: holotype of Candida parapolymorpha)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea
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Genomic context

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See HPODL_01643 in Genome Data Viewer
Location:
chromosome: VI
Exon count:
1
Sequence:
Chromosome: VI; NC_027861.1 (898218..900770, complement)

Chromosome VI - NC_027861.1Genomic Context describing neighboring genes Neighboring gene Peptidyl-prolyl cis-trans isomerase Neighboring gene hypothetical protein Neighboring gene 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027861.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_027861.1 Reference assembly

    Range
    898218..900770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014078156.1 → XP_013933631.1  Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex [Ogataea parapolymorpha DL-1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W1Q9Q3
    Conserved Domains (1) summary
    PRK14501
    Location:109 → 802
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Nucleotide Protein
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