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HPODL_00814 Mannose-6-phosphate isomerase [ Ogataea parapolymorpha DL-1 ]

Gene ID: 25770283, updated on 30-Dec-2023

Summary

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Gene symbol
HPODL_00814
Gene description
Mannose-6-phosphate isomerase
Locus tag
HPODL_00814
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ogataea parapolymorpha DL-1 (strain: DL-1, type-material: holotype of Candida parapolymorpha)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea
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Genomic context

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See HPODL_00814 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_027864.1 (1146041..1147321)

Chromosome III - NC_027864.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Antagonist of mitotic exit network protein 1 Neighboring gene Ras-related protein ORAB-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027864.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and functional analysis of the Hansenula polymorpha genomic fragment containing the YPT1 and PMI40 genes. Kim MW, et al. Yeast, 2002 Jul. PMID 12112240
  2. Genome sequence and analysis of methylotrophic yeast Hansenula polymorpha DL1. Ravin NV, et al. BMC Genomics, 2013 Nov 27. PMID 24279325, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-6-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Mannose-6-phosphate isomerase
XP_013936254.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_027864.1 Reference assembly

    Range
    1146041..1147321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014080779.1 → XP_013936254.1  Mannose-6-phosphate isomerase [Ogataea parapolymorpha DL-1]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    E7R1T0, Q8J093, W1QIL2
    Conserved Domains (1) summary
    pfam01238
    Location:7 → 387
    PMI_typeI; Phosphomannose isomerase type I
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8J093.1

Gene LinkOut

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Molecular Biology Databases
Research Materials