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LOC25502234 galactoside 2-alpha-L-fucosyltransferase [ Medicago truncatula (barrel medic) ]

Gene ID: 25502234, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25502234
Gene description
galactoside 2-alpha-L-fucosyltransferase
Locus tag
MtrunA17_Chr8g0388711
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25502234 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (46419828..46424959)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (42286652..42291800)

Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene luminal-binding protein Neighboring gene EKC/KEOPS complex subunit Tprkb Neighboring gene glutamine-dependent NAD(+) synthetase Neighboring gene uncharacterized LOC25502237

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside 2-alpha-L-fucosyltransferase; probable fucosyltransferase 8
Names
galactoside 2-alpha-L-fucosyltransferase-like protein
putative Type 1 galactoside alpha-(1,2)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    46419828..46424959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013591797.3 → XP_013447251.1  probable fucosyltransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A072TWL5
    Conserved Domains (1) summary
    cl16914
    Location:114 → 554
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  2. XM_024772601.2 → XP_024628369.1  galactoside 2-alpha-L-fucosyltransferase isoform X2

    Conserved Domains (1) summary
    cl16914
    Location:38 → 478
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

RNA

  1. XR_003007834.2 RNA Sequence

  2. XR_003007833.2 RNA Sequence

  3. XR_005643397.1 RNA Sequence

  4. XR_003007835.2 RNA Sequence

  5. XR_003007837.2 RNA Sequence

  6. XR_003007836.2 RNA Sequence

  7. XR_005643396.1 RNA Sequence

  8. XR_003007838.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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