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LOC25499615 sucrose synthase 2 [ Medicago truncatula (barrel medic) ]

Gene ID: 25499615, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25499615
Gene description
sucrose synthase 2
Locus tag
MtrunA17_Chr7g0269581
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25499615 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 7 NC_053048.1 (51522640..51528697, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 7 NC_016413.2 (44513879..44520024, complement)

Chromosome 7 - NC_053048.1Genomic Context describing neighboring genes Neighboring gene pectinesterase Neighboring gene endoglucanase 17 Neighboring gene uncharacterized LOC112416734 Neighboring gene putative GTP diphosphokinase RSH1, chloroplastic Neighboring gene uncharacterized LOC25499617

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
  2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053048.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    51522640..51528697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013594926.3 → XP_013450380.1  sucrose synthase 2

    UniProtKB/TrEMBL
    A0A072U5L4
    Conserved Domains (1) summary
    PLN00142
    Location:1 → 808
    PLN00142; sucrose synthase
Nucleotide Protein
Heading Accession and Version

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