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LOC25493910 hexosyltransferase GAUT11 [ Medicago truncatula (barrel medic) ]

Gene ID: 25493910, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25493910
Gene description
hexosyltransferase GAUT11
Locus tag
MtrunA17_Chr4g0061711
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (53755139..53758810)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (45726160..45729828)

Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene truncated transcription factor CAULIFLOWER A Neighboring gene uncharacterized LOC25493909 Neighboring gene isoaspartyl peptidase/L-asparaginase Neighboring gene isoaspartyl peptidase/L-asparaginase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosyltransferase GAUT11
Names
CAZy family GT8 glycosyltransferase
probable galacturonosyltransferase 11
putative polygalacturonate 4-alpha-galacturonosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    53755139..53758810
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013602565.3 → XP_013458019.1  hexosyltransferase GAUT11

    UniProtKB/TrEMBL
    A0A072V1Q3
    Conserved Domains (1) summary
    PLN02742
    Location:1 → 535
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
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