U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC25490289 UDP-N-acetylglucosamine transferase subunit ALG13 homolog [ Medicago truncatula (barrel medic) ]

Gene ID: 25490289, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC25490289
Gene description
UDP-N-acetylglucosamine transferase subunit ALG13 homolog
Locus tag
MtrunA17_Chr3g0143711
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (57210232..57216258)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (53787851..53793863)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC25490287 Neighboring gene lysine histidine transporter-like 8 Neighboring gene ATP-dependent zinc metalloprotease FTSH, chloroplastic Neighboring gene protein ROLLING AND ERECT LEAF 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of UDP-N-acetylglucosamine transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-N-acetylglucosamine transferase subunit ALG13 homolog
Names
putative N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    57210232..57216258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024779804.2 → XP_024635572.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X2

    UniProtKB/TrEMBL
    A0A072VDP5
    Conserved Domains (1) summary
    cl10013
    Location:28 → 136
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  2. XM_024779803.2 → XP_024635571.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X1

    UniProtKB/TrEMBL
    A0A072V2M8
    Conserved Domains (1) summary
    pfam04101
    Location:13 → 171
    Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain

  3. XM_024779802.2 → XP_024635570.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X1

    UniProtKB/TrEMBL
    A0A072V2M8
    Conserved Domains (1) summary
    pfam04101
    Location:13 → 171
    Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain

  4. XM_024779805.2 → XP_024635573.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog isoform X2

    UniProtKB/TrEMBL
    A0A072VDP5
    Conserved Domains (1) summary
    cl10013
    Location:28 → 136
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

RNA

  1. XR_005645379.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases