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LOC25488195 galactan beta-1,4-galactosyltransferase GALS3 [ Medicago truncatula (barrel medic) ]

Gene ID: 25488195, updated on 22-Apr-2023

Summary

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Gene symbol
LOC25488195
Gene description
galactan beta-1,4-galactosyltransferase GALS3
Locus tag
MtrunA17_Chr2g0296521
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25488195 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (14868702..14872531, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (14828074..14831900, complement)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene probable purine permease 4 Neighboring gene uncharacterized LOC25488192 Neighboring gene uncharacterized LOC25488196 Neighboring gene uncharacterized LOC112419020

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
  2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
galactan beta-1,4-galactosyltransferase GALS3
Names
glycosyltransferase family 92 protein
putative Glycosyltransferase family 92

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    14868702..14872531 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013607865.3 → XP_013463319.1  galactan beta-1,4-galactosyltransferase GALS3

    UniProtKB/TrEMBL
    A0A072VGR7
    Conserved Domains (1) summary
    pfam01697
    Location:262 → 507
    Glyco_transf_92; Glycosyltransferase family 92
Nucleotide Protein
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