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LOC25487117 putative callose synthase 8 [ Medicago truncatula (barrel medic) ]

Gene ID: 25487117, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25487117
Gene description
putative callose synthase 8
Locus tag
MtrunA17_Chr2g0313601
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25487117 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
41
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (36292290..36305524)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (30285855..30299181)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC25487115 Neighboring gene probable disease resistance protein At4g27220 Neighboring gene uncharacterized LOC120578231 Neighboring gene pentatricopeptide repeat-containing protein At3g14580, mitochondrial Neighboring gene C2 domain-containing protein At1g53590

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative callose synthase 8
Names
callose synthase-like protein
putative 1,3-beta-glucan synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    36292290..36305524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024776480.2 → XP_024632248.1  putative callose synthase 8

    UniProtKB/TrEMBL
    A0A072V8W0, A0A396JBR8
    Conserved Domains (3) summary
    pfam02364
    Location:1118 → 1846
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:81 → 190
    Vta1; Vta1 like
    pfam14288
    Location:345 → 458
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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