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LOC25482729 probable xyloglucan galactosyltransferase GT17 [ Medicago truncatula (barrel medic) ]

Gene ID: 25482729, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25482729
Gene description
probable xyloglucan galactosyltransferase GT17
Locus tag
MtrunA17_Chr1g0163331
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25482729 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 1 NC_053042.1 (13046940..13048600, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 1 NC_016407.2 (13051654..13053098, complement)

Chromosome 1 - NC_053042.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein At3g19850 Neighboring gene probable xyloglucan galactosyltransferase GT17 Neighboring gene alkane hydroxylase MAH1 Neighboring gene alkane hydroxylase MAH1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable xyloglucan galactosyltransferase GT17
Names
putative exostosin
xyloglucan galactosyltransferase KATAMARI-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053042.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    13046940..13048600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013611322.3 → XP_013466776.2  probable xyloglucan galactosyltransferase GT17

    UniProtKB/TrEMBL
    A0A072VGB2, A0A396JPN5
    Conserved Domains (1) summary
    pfam03016
    Location:78 → 391
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version

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