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taf7 transcription factor TFIID complex subunit Taf7 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542822, updated on 18-Sep-2024

Summary

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Official Symbol
taf7
Official Full Name
transcription factor TFIID complex subunit Taf7
Primary source
PomBase:SPAC13F5.02c
Locus tag
SPOM_SPAC13F5.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ptr6
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Genomic context

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See taf7 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (2172410..2173787, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mismatch repair ATPase msh1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glycerol dehydrogenase Gld1 Neighboring gene ncRNA Neighboring gene Vts1 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the ptr6(+) gene in fission yeast: a possible involvement of a transcriptional coactivator TAF in nucleocytoplasmic transport of mRNA. Shibuya T, et al. Genetics, 1999 Jul. PMID 10388808, Free PMC Article
  2. The fission yeast TFIIB-related factor limits RNA polymerase III to a TATA-dependent pathway of TBP recruitment. Huang Y, et al. Nucleic Acids Res, 2003 Apr 15. PMID 12682361, Free PMC Article
  3. Identification of histone H4-like TAF in Schizosaccharomyces pombe as a protein that interacts with WD repeat-containing TAF. Mitsuzawa H, et al. Nucleic Acids Res, 2002 May 1. PMID 11972332, Free PMC Article
  4. Two WD repeat-containing TATA-binding protein-associated factors in fission yeast that suppress defects in the anaphase-promoting complex. Mitsuzawa H, et al. J Biol Chem, 2001 May 18. PMID 11279037
  5. Cryo-EM reveals promoter DNA binding and conformational flexibility of the general transcription factor TFIID. Elmlund H, et al. Structure, 2009 Nov 11. PMID 19913479

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity EXP
Inferred from Experiment
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA polymerase II preinitiation complex assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription initiation at RNA polymerase II promoter EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
part_of transcription factor TFIID complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of transcription factor TFIID complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
transcription factor TFIID complex subunit Taf7

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2172410..2173787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019082.3 → NP_593650.1  transcription factor TFIID complex subunit Taf7 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593650.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13701
    Conserved Domains (2) summary
    COG5414
    Location:1 → 393
    Taf7; TATA-binding protein-associated factor Taf7, part of the TFIID transcription initiation complex [Transcription]
    pfam04658
    Location:72 → 222
    TAFII55_N; TAFII55 protein conserved region
Nucleotide Protein
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Gene LinkOut

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