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sdj1 glyoxylase III Sdj1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541772, updated on 18-Sep-2024

Summary

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Official Symbol
sdj1
Official Full Name
glyoxylase III Sdj1
Primary source
PomBase:SPAC22E12.03c
Locus tag
SPOM_SPAC22E12.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
hsp3106; spDJ-1
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Genomic context

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See sdj1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (5022786..5023851, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene phosphoenolpyruvate transmembrane transporter Pet3 Neighboring gene ncRNA Neighboring gene splicing factor, WW domain -binding Rbm42 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene superoxide dismutase Cu chaperone Ccs1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of glutathione (GSH)-independent glyoxalase III from Schizosaccharomyces pombe. Zhao Q, et al. BMC Evol Biol, 2014 Apr 23. PMID 24758716, Free PMC Article
  2. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  3. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables glyoxalase III activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular detoxification NAS
Non-traceable Author Statement
more info
  
involved_in glyoxal metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in response to oxidative stress IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
glyoxylase III Sdj1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5022786..5023851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020258.3 → NP_594829.1  glyoxylase III Sdj1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594829.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10356
    Conserved Domains (2) summary
    TIGR01383
    Location:3 → 186
    not_thiJ; DJ-1 family protein
    pfam01965
    Location:2 → 174
    DJ-1_PfpI; DJ-1/PfpI family
Nucleotide Protein
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