U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

prr1 stress-responsive DNA-binding transcription factor Prr1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541756, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
prr1
Official Full Name
stress-responsive DNA-binding transcription factor Prr1
Primary source
PomBase:SPAC8C9.14
Locus tag
SPOM_SPAC8C9.14
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See prr1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003424.3 (3665932..3669087)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene translation initiation factor eIF2B epsilon subunit tif225 Neighboring gene ncRNA Neighboring gene V-type ATPase inhibitor and disassembly protein in response to oxidative stress Oxr1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A fission yeast gene (prr1(+)) that encodes a response regulator implicated in oxidative stress response. Ohmiya R, et al. J Biochem, 1999 Jun. PMID 10348908
  2. Characterization of the Prr1 response regulator with special reference to sexual development in Schizosaccharomyces pombe. Nakamichi N, et al. Biosci Biotechnol Biochem, 2003 Mar. PMID 12723602
  3. The transcription factors Pap1 and Prr1 collaborate to activate antioxidant, but not drug tolerance, genes in response to H2O2. Calvo IA, et al. Nucleic Acids Res, 2012 Jun. PMID 22344694, Free PMC Article
  4. The Prr1 response regulator is essential for transcription of ste11+ and for sexual development in fission yeast. Ohmiya R, et al. Mol Gen Genet, 2000 Nov. PMID 11129048
  5. Chronological lifespan extension by Ecl1 family proteins depends on Prr1 response regulator in fission yeast. Ohtsuka H, et al. Genes Cells, 2012 Jan. PMID 22212525

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of induction of conjugation with cellular fusion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IPI
Inferred from Physical Interaction
more info
 PubMed 
is_active_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
stress-responsive DNA-binding transcription factor Prr1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3665932..3669087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019707.3 → NP_594284.1  stress-responsive DNA-binding transcription factor Prr1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594284.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14283, Q9UTX5
    Conserved Domains (4) summary
    smart00415
    Location:6 → 109
    HSF; heat shock factor
    COG0745
    Location:368 → 470
    OmpR; DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]
    COG5169
    Location:1 → 286
    HSF1; Heat shock transcription factor [Transcription]
    cd00156
    Location:371 → 470
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials