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lsh1 protein Lhs1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541537, updated on 18-Sep-2024

Summary

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Official Symbol
lsh1
Official Full Name
protein Lhs1
Primary source
PomBase:SPAC1F5.06
Locus tag
SPOM_SPAC1F5.06
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See lsh1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (276657..281232, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PAK-like kinase Shk2 Neighboring gene plasma membrane stretch-activated calcium ion channel Yam8 Neighboring gene ncRNA Neighboring gene protoporphyrinogen oxidase Neighboring gene ncRNA Neighboring gene exocytic docking protein Mso1 Neighboring gene cytokinetic formin Cdc12 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
  
enables adenyl-nucleotide exchange factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein folding in endoplasmic reticulum IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum HDA PubMed 
part_of endoplasmic reticulum chaperone complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum lumen ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
protein Lhs1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    276657..281232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018267.3 → NP_592867.1  protein Lhs1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592867.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10061
    Conserved Domains (2) summary
    cd10230
    Location:25 → 412
    HYOU1-like_NBD; Nucleotide-binding domain of human HYOU1 and similar proteins
    COG0443
    Location:19 → 667
    DnaK; Molecular chaperone DnaK (HSP70) [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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