U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lys3 saccharopine dehydrogenase Lys3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541500, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
lys3
Official Full Name
saccharopine dehydrogenase Lys3
Primary source
PomBase:SPAC227.18
Locus tag
SPOM_SPAC227.18
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPAC2F7.01
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lys3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (530279..531981)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene GINS complex subunit Psf3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene NLI-interacting factor-like phosphatase Psr1 Neighboring gene DYRK family cell polarity protein kinase Pom1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Lysine biosynthesis pathway and biochemical blocks of lysine auxotrophs of Schizosaccharomyces pombe. Ye ZH, et al. J Bacteriol, 1988 Dec. PMID 3142867, Free PMC Article
  2. A genetic engineering solution to the "arginine conversion problem" in stable isotope labeling by amino acids in cell culture (SILAC). Bicho CC, et al. Mol Cell Proteomics, 2010 Jul. PMID 20460254, Free PMC Article
  3. Fission yeast autophagy induced by nitrogen starvation generates a nitrogen source that drives adaptation processes. Kohda TA, et al. Genes Cells, 2007 Feb. PMID 17295836
  4. Six new amino acid-auxotrophic markers for targeted gene integration and disruption in fission yeast. Ma Y, et al. Curr Genet, 2007 Aug. PMID 17622533
  5. A large complex mediated by Moc1, Moc2 and Cpc2 regulates sexual differentiation in fission yeast. Paul SK, et al. FEBS J, 2009 Sep. PMID 19682301

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables saccharopine dehydrogenase (NAD+, L-lysine-forming) activity ISO
Inferred from Sequence Orthology
more info
  
enables saccharopine dehydrogenase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in lysine biosynthetic process via aminoadipic acid IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in lysine biosynthetic process via aminoadipic acid IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
saccharopine dehydrogenase Lys3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    530279..531981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018372.3 → NP_592972.1  saccharopine dehydrogenase Lys3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592972.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09694, Q9UTC1
    Conserved Domains (1) summary
    cd12188
    Location:4 → 366
    SDH; Saccharopine Dehydrogenase NAD-binding and catalytic domains
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials