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PAP_RS10155 SdpI family protein [ Palaeococcus pacificus DY20341 ]

Gene ID: 25399994, updated on 22-Oct-2024

Summary

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Gene symbol
PAP_RS10155
Gene description
SdpI family protein
Locus tag
PAP_RS10155
Gene type
protein coding
Organism
Palaeococcus pacificus DY20341 (strain: DY20341, culture-collection: DSM:24777, culture-collection: JCM:17873, type-material: type strain of Palaeococcus pacificus)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus
Old locus tag
PAP_10035
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Genomic context

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NZ_CP006019.1Genomic Context describing neighboring genes Neighboring gene DUF3887 domain-containing protein Neighboring gene PadR family transcriptional regulator Neighboring gene DUF1648 domain-containing protein Neighboring gene nitrilase Neighboring gene metallophosphoesterase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP006019.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A three-protein signaling pathway governing immunity to a bacterial cannibalism toxin. Ellermeier CD, et al. Cell, 2006 Feb 10. PMID 16469701
  2. Complete Genome Sequence of Hyperthermophilic Piezophilic Archaeon Palaeococcus pacificus DY20341T, Isolated from Deep-Sea Hydrothermal Sediments. Zeng X, et al. Genome Announc, 2015 Sep 17. PMID 26383653, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
SdpI family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP006019.1 Reference assembly

    Range
    1814434..1815249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_052649141.1 SdpI family protein [Palaeococcus pacificus]

    UniProtKB/TrEMBL
    A0A075LW00
    Conserved Domains (2) summary
    pfam07853
    Location:135 → 183
    DUF1648; Protein of unknown function (DUF1648)
    pfam13630
    Location:32 → 93
    SdpI; SdpI/YhfL protein family
Nucleotide Protein
Heading Accession and Version

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