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arf6 ADP-ribosylation factor-like protein Arf6 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539937, updated on 18-Sep-2024

Summary

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Official Symbol
arf6
Official Full Name
ADP-ribosylation factor-like protein Arf6
Primary source
PomBase:SPBC1539.08
Locus tag
SPOM_SPBC1539.08
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See arf6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (4375729..4377177)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene acyl-coenzyme A binding protein Neighboring gene glutathione-dependent formaldehyde dehydrogenase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene anthranilate synthase component II Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Nop16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ADP-ribosylation factor arf6p may function as a molecular switch of new end take off in fission yeast. Fujita A. Biochem Biophys Res Commun, 2008 Feb 1. PMID 18060866
  2. Haploinsufficiency of the Sec7 guanine nucleotide exchange factor gea1 impairs septation in fission yeast. Eckler AM, et al. PLoS One, 2013. PMID 23457617, Free PMC Article
  3. Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division. Opalko HE, et al. J Cell Biol, 2022 Feb 7. PMID 34958661, Free PMC Article
  4. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  5. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division.
    Title: Arf6 anchors Cdr2 nodes at the cell cortex to control cell size at division.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein-membrane adaptor activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell growth mode switching, monopolar to bipolar IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of G2/M transition of mitotic cell cycle IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of cytokinesis IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of Cdr2 medial cortical node complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cell cortex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cell cortex of cell tip IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cell division site IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in division septum IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ADP-ribosylation factor-like protein Arf6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    4375729..4377177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023842.3 → NP_596822.1  ADP-ribosylation factor-like protein Arf6 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596822.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7Z2
    Conserved Domains (1) summary
    cd04149
    Location:13 → 180
    Arf6; ADP ribosylation factor 6 (Arf6)
Nucleotide Protein
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