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gpi2 pig-C family GPI synthesis protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539262, updated on 18-Sep-2024

Summary

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Official Symbol
gpi2
Official Full Name
pig-C family GPI synthesis protein
Primary source
PomBase:SPCC550.04c
Locus tag
SPOM_SPCC550.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See gpi2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003421.2 (1191599..1193192, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene Prp19 complex subunit, RNA-binding Cwf5 Neighboring gene Ski complex RNA helicase Ski2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to phosphatidylinositol N-acetylglucosaminyltransferase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum HDA PubMed 
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
pig-C family GPI synthesis protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1191599..1193192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023087.3 → NP_588096.1  pig-C family GPI synthesis protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588096.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59802
    Conserved Domains (1) summary
    pfam06432
    Location:38 → 313
    GPI2; Phosphatidylinositol N-acetylglucosaminyltransferase
Nucleotide Protein
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