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amk2 serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539130, updated on 18-Sep-2024

Summary

Official Symbol
amk2
Official Full Name
serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2
Primary source
PomBase:SPCC1919.03c
Locus tag
SPOM_SPCC1919.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See amk2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003421.2 (2207485..2209027, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent (CaMKK) protein kinase kinase Ckk2/Ppk34 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GPI synthesis protein pig-X Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein kinase regulator activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in CAMKK-AMPK signaling cascade IC
Inferred by Curator
more info
 
involved_in induction of conjugation with cellular fusion EXP
Inferred from Experiment
more info
PubMed 
involved_in positive regulation of flocculation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytosol HDA PubMed 
part_of nucleotide-activated protein kinase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of nucleotide-activated protein kinase complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    2207485..2209027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023476.3NP_588485.1  serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588485.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P78789, Q1L851, Q9UU43
    Conserved Domains (2) summary
    smart01010
    Location:202294
    AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain
    pfam16561
    Location:100180
    AMPK1_CBM; Glycogen recognition site of AMP-activated protein kinase