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Mafk MAF bZIP transcription factor K [ Rattus norvegicus (Norway rat) ]

Gene ID: 246760, updated on 14-Nov-2024

Summary

Official Symbol
Mafkprovided by RGD
Official Full Name
MAF bZIP transcription factor Kprovided by RGD
Primary source
RGD:628633
See related
EnsemblRapid:ENSRNOG00000065794 AllianceGenome:RGD:628633
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables RING-like zinc finger domain binding activity. Involved in nervous system development. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Orthologous to human MAFK (MAF bZIP transcription factor K). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Lung (RPKM 82.6), Heart (RPKM 79.4) and 9 other tissues See more
Orthologs
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Genomic context

See Mafk in Genome Data Viewer
Location:
12q11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (19948473..19970351, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (14834628..14856414, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (16923989..16934706, complement)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene proteasome assembly chaperone 3 Neighboring gene transmembrane protein 184A Neighboring gene uncharacterized LOC102546414 Neighboring gene integrator complex subunit 1 Neighboring gene MICAL-like 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription repressor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables RING-like zinc finger domain binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables transcription cis-regulatory region binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
transcription factor MafK
Names
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K
v-maf musculoaponeurotic fibrosarcoma oncogene homolog K

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145673.2NP_663706.2  transcription factor MafK

    See identical proteins and their annotated locations for NP_663706.2

    Status: PROVISIONAL

    Source sequence(s)
    BC070906
    UniProtKB/TrEMBL
    Q6IRI7, Q8K4B3
    Related
    ENSRNOP00000111858.1, ENSRNOT00000001720.6
    Conserved Domains (1) summary
    cd14717
    Location:46115
    bZIP_Maf_small; Basic leucine zipper (bZIP) domain of small musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    19948473..19970351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039089073.2XP_038945001.1  transcription factor MafK isoform X1

    UniProtKB/TrEMBL
    Q6IRI7, Q8K4B3
    Conserved Domains (1) summary
    cd14717
    Location:46115
    bZIP_Maf_small; Basic leucine zipper (bZIP) domain of small musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
  2. XM_006248915.5XP_006248977.1  transcription factor MafK isoform X1

    See identical proteins and their annotated locations for XP_006248977.1

    UniProtKB/TrEMBL
    Q6IRI7, Q8K4B3
    Conserved Domains (1) summary
    cd14717
    Location:46115
    bZIP_Maf_small; Basic leucine zipper (bZIP) domain of small musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain