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HS6ST1B Heparan-sulfate 6-O-sulfotransferase 1-B [ Schistosoma haematobium ]

Gene ID: 24596345, updated on 23-Nov-2023

Summary

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Gene symbol
HS6ST1B
Gene description
Heparan-sulfate 6-O-sulfotransferase 1-B
Locus tag
MS3_00002589
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma haematobium (nat-host: Mesocricetus auratus)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
Old locus tag
MS3_0015497
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Genomic context

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See HS6ST1B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_067196.1 (11814692..11826336)

Chromosome 1 - NC_067196.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene blue light receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067196.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing. Stroehlein AJ, et al. Gigascience, 2019 Sep 1. PMID 31494670, Free PMC Article
  2. Whole-genome sequence of Schistosoma haematobium. Young ND, et al. Nat Genet, 2012 Jan 15. PMID 22246508
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Heparan-sulfate 6-O-sulfotransferase 1-B
XP_051073150.1
  • EggNog:ENOG410V4PS
    COG:O

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067196.1 Reference assembly

    Range
    11814692..11826336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051210184.1 → XP_051073150.1  Heparan-sulfate 6-O-sulfotransferase 1-B [Schistosoma haematobium]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A095A1J7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases