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GALNT1 Polypeptide N-acetylgalactosaminyltransferase 1 [ Schistosoma haematobium ]

Gene ID: 24596114, updated on 23-Nov-2023

Summary

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Gene symbol
GALNT1
Gene description
Polypeptide N-acetylgalactosaminyltransferase 1
Locus tag
MS3_00002472
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma haematobium (nat-host: Mesocricetus auratus)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
Old locus tag
MS3_0013305
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Genomic context

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See GALNT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_067196.1 (92254983..92308143, complement)

Chromosome 1 - NC_067196.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene BAG molecular chaperone regulator 3 Neighboring gene Craniofacial development protein 2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067196.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing. Stroehlein AJ, et al. Gigascience, 2019 Sep 1. PMID 31494670, Free PMC Article
  2. Whole-genome sequence of Schistosoma haematobium. Young ND, et al. Nat Genet, 2012 Jan 15. PMID 22246508
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Polypeptide N-acetylgalactosaminyltransferase 1
XP_035586230.2
  • EggNog:ENOG410V43X
    COG:O
    CAZy:GT27
    CAZy:GT2_Glycos_transf_2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067196.1 Reference assembly

    Range
    92254983..92308143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035730302.2 → XP_035586230.2  Polypeptide N-acetylgalactosaminyltransferase 1 [Schistosoma haematobium]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A922LZJ3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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