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FUT9_7 Alpha-(1,3)-fucosyltransferase 9 [ Schistosoma haematobium ]

Gene ID: 24594968, updated on 23-Nov-2023

Summary

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Gene symbol
FUT9_7
Gene description
Alpha-(1,3)-fucosyltransferase 9
Locus tag
MS3_00008027
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma haematobium (nat-host: Mesocricetus auratus)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
Old locus tag
MS3_0017431
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Genomic context

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See FUT9_7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_067199.1 (39042922..39087535, complement)

Chromosome 4 - NC_067199.1Genomic Context describing neighboring genes Neighboring gene Nucleoporin-62 C-terminal-like protein Neighboring gene Alpha-(1,3)-fucosyltransferase 9 Neighboring gene hypothetical protein Neighboring gene Importin 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067199.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing. Stroehlein AJ, et al. Gigascience, 2019 Sep 1. PMID 31494670, Free PMC Article
  2. Whole-genome sequence of Schistosoma haematobium. Young ND, et al. Nat Genet, 2012 Jan 15. PMID 22246508
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in RNA polymerase II preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SLIK (SAGA-like) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Alpha-(1,3)-fucosyltransferase 9
XP_051066950.1
  • EggNog:ENOG410VD39
    COG:K
    CAZy:GT10
XP_051066951.1
  • EggNog:ENOG410VD39
    COG:K
    BUSCO:EOG091G0Q1X

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067199.1 Reference assembly

    Range
    39042922..39087535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051216362.1 → XP_051066950.1  Alpha-(1,3)-fucosyltransferase 9 [Schistosoma haematobium]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A922INX6

  2. XM_051216363.1 → XP_051066951.1  Alpha-(1,3)-fucosyltransferase 9, variant 2 [Schistosoma haematobium]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A922INZ5
Nucleotide Protein
Heading Accession and Version

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