U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C1GALT1_3 Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [ Schistosoma haematobium ]

Gene ID: 24589359, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
C1GALT1_3
Gene description
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
Locus tag
MS3_00007893
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma haematobium (nat-host: Mesocricetus auratus)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
Old locus tag
MS3_0018187
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See C1GALT1_3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_067199.1 (33104768..33115732)

Chromosome 4 - NC_067199.1Genomic Context describing neighboring genes Neighboring gene Autophagy- protein 9A Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067199.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing. Stroehlein AJ, et al. Gigascience, 2019 Sep 1. PMID 31494670, Free PMC Article
  2. Whole-genome sequence of Schistosoma haematobium. Young ND, et al. Nat Genet, 2012 Jan 15. PMID 22246508
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
XP_051066803.1
  • EggNog:ENOG41KOG2246
    COG:G

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067199.1 Reference assembly

    Range
    33104768..33115732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051216232.1 → XP_051066803.1  Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Schistosoma haematobium]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A922IQ31
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases