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MS3_00010677 hypothetical protein [ Schistosoma haematobium ]

Gene ID: 24589268, updated on 10-Oct-2024

Summary

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Gene symbol
MS3_00010677
Gene description
hypothetical protein
Locus tag
MS3_00010677
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma haematobium (nat-host: Mesocricetus auratus)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
Old locus tag
MS3_0011859
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Genomic context

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See MS3_00010677 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_067198.1 (44470010..44475130)

Chromosome 3 - NC_067198.1Genomic Context describing neighboring genes Neighboring gene Small integral membrane protein 14 Neighboring gene Glycoside hydrolase 2 (Mannanase, beta-galactosidase) Neighboring gene Inactive phospholipase C-like protein 1 Neighboring gene Serine/threonine/tyrosine-interacting-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067198.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing. Stroehlein AJ, et al. Gigascience, 2019 Sep 1. PMID 31494670, Free PMC Article
  2. Whole-genome sequence of Schistosoma haematobium. Young ND, et al. Nat Genet, 2012 Jan 15. PMID 22246508
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_051069969.1
  • EggNog:ENOG410V50K
    COG:G
    CAZy:GT76
    BUSCO:EOG091G05ZJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067198.1 Reference assembly

    Range
    44470010..44475130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051219075.1 → XP_051069969.1  hypothetical protein MS3_00010677 [Schistosoma haematobium]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A922LLN9
Nucleotide Protein
Heading Accession and Version

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