Nim1k NIM1 serine/threonine protein kinase [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Nim1kprovided by MGI
Official Full Name: NIM1 serine/threonine protein kinaseprovided by MGI
Primary source: MGI:MGI:2442399
See related: Ensembl:ENSMUSG00000095930 AllianceGenome:MGI:2442399
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Nim1; E130304F04Rik
Summary: Predicted to enable ATP binding activity; magnesium ion binding activity; and protein serine/threonine kinase activity. Predicted to be involved in protein phosphorylation. Is expressed in central nervous system; hippocampus; retina; retina inner nuclear layer; and retina outer nuclear layer. Orthologous to human NIM1K (NIM1 serine/threonine protein kinase). [provided by Alliance of Genome Resources, Oct 2024]
Expression: Broad expression in frontal lobe adult (RPKM 2.5), thymus adult (RPKM 2.4) and 20 other tissues See more
Orthologs: human all
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Genomic context

Location:: 13; 13 D2.3

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	13	NC_000079.7 (120171630..120217418, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	13	NC_000079.6 (119710094..119755882, complement)

Chromosome 13 - NC_000079.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables ATP binding	ISO Inferred from Sequence Orthology more info
enables ATP binding	ISS Inferred from Sequence or Structural Similarity more info
enables histone H2AS1 kinase activity	IEA Inferred from Electronic Annotation more info
enables magnesium ion binding	ISO Inferred from Sequence Orthology more info
enables magnesium ion binding	ISS Inferred from Sequence or Structural Similarity more info
enables protein serine kinase activity	IEA Inferred from Electronic Annotation more info
enables protein serine/threonine kinase activity	IBA Inferred from Biological aspect of Ancestor more info
enables protein serine/threonine kinase activity	ISO Inferred from Sequence Orthology more info
enables protein serine/threonine kinase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in chromatin remodeling	IEA Inferred from Electronic Annotation more info
involved_in protein phosphorylation	ISO Inferred from Sequence Orthology more info
involved_in protein phosphorylation	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: serine/threonine-protein kinase NIM1

NP_780747.1

EC 2.7.11.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_175538.3 → NP_780747.1 serine/threonine-protein kinase NIM1

See identical proteins and their annotated locations for NP_780747.1

Status: PROVISIONAL

Source sequence(s)

AK048694

Consensus CDS

CCDS56902.1

UniProtKB/Swiss-Prot

Q148V1, Q80XC1, Q8BHI9, Q8BXQ9

Related

ENSMUSP00000136377.2, ENSMUST00000178142.2

Conserved Domains (2) summary

smart00220
Location:74 → 325

S_TKc; Serine/Threonine protein kinases, catalytic domain

cd14075
Location:71 → 325

STKc_NIM1; Catalytic domain of the Serine/Threonine Kinase, NIM1