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GLRG_03307 Ham1 family protein [ Colletotrichum graminicola M1.001 ]

Gene ID: 24408672, updated on 17-May-2024

Summary

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Gene symbol
GLRG_03307
Gene description
Ham1 family protein
Locus tag
GLRG_03307
See related
FungiDB:GLRG_03307; VEuPathDB:GLRG_03307
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Colletotrichum graminicola M1.001 (strain: M1.001, type-material: culture from epitype of Colletotrichum graminicola)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum graminicola species complex
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Genomic context

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See GLRG_03307 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_007361013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene POS9-activating factor FAP7 Neighboring gene peptidase family C78 Neighboring gene Ras family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007361013.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleoside triphosphate diphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleoside triphosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Ham1 family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007361013.1 Reference assembly

    Range
    1104737..1105591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008093992.1 → XP_008092183.1  Ham1 family protein [Colletotrichum graminicola M1.001]

    See identical proteins and their annotated locations for XP_008092183.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    E3QBC5
    Conserved Domains (1) summary
    cd00515
    Location:7 → 180
    HAM1; NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A ...
Nucleotide Protein
Heading Accession and Version

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